The Zebrafish Information Network (ZFIN): the zebrafish model organism database
The Zebrafish Information Network (ZFIN): the zebrafish model organism database
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DOI：
10.1093/nar/gkg027
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发表时间：
2003-01-01
影响因子：
14.9
通讯作者：
Westerfield, M
中科院分区：
文献类型：
--
作者：
Sprague, J;Clements, D;Westerfield, M
斑马鱼信息网络（ZFIN）是一个基于网络的社区资源，作为管理和整合斑马鱼遗传、基因组和发育数据的集中位置。ZFIN可在http://zfin.org公开访问。ZFIN提供了突变体、基因、遗传标记、制图面板、出版物和社区联系数据的集成表示。ZFIN最近的改进包括：(i)一个解剖学词典，它提供了解剖学术语的受控词汇，按发育阶段分组，可用于注释和查询基因表达数据；（ii）基因表达数据；（iii）扩大对基因组序列的支持；（iv）使用基因本体（\GO）术语的标准化词汇进行基因注释，可用于阐明斑马鱼和其他生物的基因产物之间的关系；(v)与其他数据库（NCBI、Sanger研究所和SWISS-PROT）合作，在共享管理的基础上提供标准化和互联。
The Zebrafish Information Network (ZFIN) is a web based community resource that serves as a centralized location for the curation and integration of zebrafish genetic, genomic and developmental data. ZFIN is publicly accessible at http://zfin.org. ZFIN provides an integrated representation of mutants, genes, genetic markers, mapping panels, publications and community contact data. Recent enhancements to ZFIN include: (i) an anatomical dictionary that provides a controlled vocabulary of anatomical terms, grouped by developmental stages, that may be used to annotate and query gene expression data; (ii) gene expression data; (iii) expanded support for genome sequence; (iv) gene annotation using the standardized vocabulary of Gene Ontology ( \GO) terms that can be used to elucidate relationships between gene products in zebrafish and other organisms; and (v) collaborations with other databases (NCBI, Sanger Institute and SWISS-PROT) to provide standardization and interconnections based on shared curation.