GenBank.

GenBank.
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DOI:
10.1093/nar/gkq1079
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发表时间:
2011-01
影响因子:
14.9
通讯作者:
Sayers EW
Sayers EW
中科院分区:
生物学2区
文献类型:
--
作者:
Benson DA;Karsch-Mizrachi I;Lipman DJ;Ostell J;Sayers EW

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Genbank®是一个综合数据库,包含在属或更低属于属或更低的380 000多种生物体的公开可用的核苷酸序列,主要是通过单个实验室的提交和大规模测序项目的批量提交获得的,包括整个基因组shot弹枪(WGS)(WGS)。和环境采样项目。 DDBJ可以通过NCBI Entrez检索系统来确保全球范围内的覆盖范围GenBank和其他序列数据库的序列相似性搜索。政府。
GenBank® is a comprehensive database that contains publicly available nucleotide sequences for more than 380 000 organisms named at the genus level or lower, obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects, including whole genome shotgun (WGS) and environmental sampling projects. Most submissions are made using the web-based BankIt or standalone Sequin programs, and accession numbers are assigned by GenBank staff upon receipt. Daily data exchange with the European Nucleotide Archive (ENA) and the DNA Data Bank of Japan (DDBJ) ensures worldwide coverage. GenBank is accessible through the NCBI Entrez retrieval system that integrates data from the major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and the biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP. To access GenBank and its related retrieval and analysis services, begin at the NCBI Homepage: www.ncbi.nlm.nih.gov.