Dnmt3a-CD is less susceptible to bulky benzo[a]pyrene diol epoxide-derived DNA lesions than prokaryotic DNA methyltransferases.

Dnmt3a-CD is less susceptible to bulky benzo[a]pyrene diol epoxide-derived DNA lesions than prokaryotic DNA methyltransferases.
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DOI:
10.1021/bi101717b
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发表时间:
2011-02-08
期刊:
影响因子:
2.9
通讯作者:
Gromova ES
Gromova ES
中科院分区:
生物学3区
文献类型:
--
作者:
Lukashevich OV;Baskunov VB;Darii MV;Kolbanovskiy A;Baykov AA;Gromova ES

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苯并[a]芘(B[a]P)是一种典型的环境多环芳烃污染物。在活生物体中,B[a]P代谢为遗传毒性抗苯并[a]芘二醇环氧化物,该环氧化物与细胞DNA反应形成立体异构抗B [a]PDE-N2-dG加合物。在这项研究中,我们探讨了加合物的立体化学和双链DNA底物的位置对小鼠从头DNA甲基转移酶Dnmt 3a(Dnmt 3a-CD)的催化结构域的功能特性的影响。制备了许多18-mer双链体,其含有位点特异性掺入的(+)-和(−)-反式-抗B[a]PDE-N2-dG损伤,这些损伤位于靶胞嘧啶残基的3′-和5′-相邻和相对处。与未受损的DNA双链体相比,Dnmt 3a-CD以高达5倍的亲和力与DNA双链体协同结合。甲基化测定显示,受损双链体的甲基化反应速率降低1.7-6.3倍。B[a]PDE修饰刺激非生产性结合,并显著有利于Dnmt 3a-CD的底物抑制,与DNA甲基化状态无关。后者的效果是敏感的B[a]PDE-N2-dG加合物的位置和立体化学。反式-抗B[a]PDE-N2-dG加合物对Dnmt 3a-CD的总体影响比我们先前研究的原核甲基转移酶的情况下的有害性小。
Benzo[a]pyrene (B[a]P) is a well-characterized environmental polycyclic aromatic hydrocarbon pollutant. In living organisms, B[a]P is metabolized to the genotoxic anti-benzo[a]pyrene diol epoxide that reacts with cellular DNA to form stereoisomeric anti-B[a]PDE-N2-dG adducts. In this study, we explored the effects of adduct stereochemistry and position in double-stranded DNA substrates on the functional characteristics of the catalytic domain of murine de novo DNA methyltransferase Dnmt3a (Dnmt3a-CD). A number of 18-mer duplexes containing site-specifically incorporated (+)- and (−)-trans-anti-B[a]PDE-N2-dG lesions located 3′- and 5′-adjacent to and opposite the target cytosine residue were prepared. The Dnmt3a-CD binds cooperatively to the DNA duplexes with an up to 5-fold greater affinity as compared to the undamaged DNA duplexes. Methylation assays showed a 1.7–6.3 fold decrease of the methylation reaction rates for the damaged duplexes. B[a]PDE modifications stimulated a non-productive binding and markedly favoured substrate inhibition of Dnmt3a-CD independently of DNA methylation status. The latter effect was sensitive to the position and stereochemistry of the B[a]PDE-N2-dG adducts. The overall effect of trans-anti-B[a]PDE-N2-dG adducts on Dnmt3a-CD was less detrimental than in the case of the prokaryotic methyltransferases we previously investigated.
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