Rigorous performance evaluation in protein structure modelling and implications for computational biology
Rigorous performance evaluation in protein structure modelling and implications for computational biology
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DOI：
10.1098/rstb.2005.1810
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发表时间：
2006-03-29
影响因子：
6.3
通讯作者：
Moult, J
中科院分区：
文献类型：
--
作者：
Moult, J
原则上，给定蛋白质的氨基酸序列，就可以计算出相应的三维结构。基于这一前提的结构建模方法已经发展了40多年。在过去的十年中，一系列社区范围内的实验（称为结构预测的关键评估（CASP））评估了技术的现状，提供了该领域已经取得的成就的详细图景，我们正在取得进展的地方，以及仍然存在的主要问题。CASP严格的评估程序伴随着实质性的进展。从计算生物学的这一领域中吸取的经验教训为提高整个领域的严谨性提供了一套原则。
In principle, given the amino acid sequence of a protein, it is possible to compute the corresponding three-dimensional structure. Methods for modelling structure based on this premise have been under development for more than 40 years. For the past decade, a series of community wide experiments (termed Critical Assessment of Structure Prediction (CASP)) have assessed the state of the art, providing a detailed picture of what has been achieved in the field, where we are making progress, and what major problems remain. The rigorous evaluation procedures of CASP have been accompanied by substantial progress. Lessons from this area of computational biology suggest a set of principles for increasing rigor in the field as a whole.