TcruziDB: an integrated Trypanosoma cruzi genome resource.

TcruziDB: an integrated Trypanosoma cruzi genome resource.
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TcruziDB:综合的克氏锥虫基因组资源。

DOI:
10.1093/nar/gkh049
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发表时间:
2004
期刊:
Nucleic acids research.
影响因子:
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通讯作者:
Kissinger,JessicaC
Kissinger,JessicaC
中科院分区:
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文献类型:
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作者:
Luchtan,Michael;Warade,Chetna;Weatherly,DBrent;Degrave,WimM;Tarleton,RickL;Kissinger,JessicaC

文献摘要

相似文献

TruziDB(http://TcruziDB.org)是查加斯病病原体克氏锥虫的完整基因组数据库。该数据库目前将所有可用的序列数据(基因组、BAC、EST)合并在一个用户友好的位置。该数据库包含各种专门设计的工具,用于通过BLAST搜索未注释的草稿序列、预先计算的BLAST结果的关键字搜索以及蛋白质基序搜索。该数据库的版本1.0包含TIGR-Karolinska-SBRITrypanosoma Cruzi基因组联盟产生的110万个序列读数中的近7.3亿个核苷酸的基因组序列,以及从其他来源获得的1500万个聚集性EST和基因组序列。当注释、微阵列和蛋白质组数据可用时,数据库将使用GUS(http://www.gusdb.)合并和整合这些数据Org)关系框架。
TcruziDB ( http://TcruziDB.org ) is an integrated genome database for the parasitic organismTrypanosoma cruzi, the causative agent of Chagas’ disease. The database currently incorporates all available sequence data (Genomic, BAC, EST) in a single user‐friendly location. The database contains a variety of tools specifically designed for searching unannotated draft sequence via BLAST, keyword searches of pre‐computed BLAST results, and protein motif searches. Release 1.0 of the database contains nearly 730 million bp of genome sequence from 1.1 million sequence reads generated by the TIGR–Karolinska–SBRITrypanosoma cruziGenome Consortium and 15 million bp of clustered EST and genomic sequence obtained from other sources. As annotation, microarray and proteomic data become available, the database will incorporate and integrate these data using the GUS ( http://www.gusdb. org ) relational framework.