Protocol: a rapid and cost effective method for plant genomic DNA isolation using regenerated silica columns in combination with CTAB

Protocol: a rapid and cost effective method for plant genomic DNA isolation using regenerated silica columns in combination with CTAB
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DOI:
10.1016/s2095-3119(16)61534-4
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发表时间:
2017
影响因子:
4.8
通讯作者:
Paula Jameson
Paula Jameson
中科院分区:
农林科学1区
文献类型:
--
作者:
Zeyu Fu;Jiancheng Song;Paula Jameson

文献摘要

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Isolation of high quality DNA from multiple samples can be both time-consuming and expensive. We have developed a.combined protocol to reduce the time component of the hexadecyltrimethylammonium bromide (CTAB) extraction method.and reduced costs by regenerating the silica columns used to purify genomic DNA. We present data that shows, by increasing.the temperature used during the CTAB method, the time required to extract crude genomic DNA can be reduced..We show that silica columns can be regenerated using HCl and still maintain their DNA-binding capacity. Furthermore, we.show both spectrophotometrically, and by restriction enzyme cutting, that the quality of the eluted DNA is high. Critically,.using both genomic DNA from pea and perennial ryegrass we demonstrate, using species-specific PCR primers, that there.is no carry-over of DNA from repeated use of a single column. The main advantages of the method are high yield, high.quality, cost effectiveness and time-saving. This method could satisfy demand when large numbers of plant genomic DNA.samples are required, for example from targeting induced local lesions in genomes (TILLING) populations.