Development of new simple molecular probes of DNA bulged structures.

Development of new simple molecular probes of DNA bulged structures.
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DOI:
10.1016/j.bmcl.2006.03.006
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发表时间:
2006-06
影响因子:
2.7
通讯作者:
Ziwei Xiao;L. Kappen;I. Goldberg
Ziwei Xiao;L. Kappen;I. Goldberg
中科院分区:
医学4区
文献类型:
--
作者:
Ziwei Xiao;L. Kappen;I. Goldberg

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NCSi-gb is a neocarzinostatin chromophore (NCS-chrom) metabolite which binds strongly to certain two-base DNA bulges. Compared with previously reported NCSi-gb analogues, a new analogue with a different aminoglycoside position was synthesized, and it showed strong fluorescence and improved binding and sequence selectivity to DNA bulges. The N-dimethylated form of this analogue had a similar binding pattern, and it competitively inhibited bulge-specific cleavage by NCS-chrom.