Determination of the impact of DNA damage sites on DNA duplex stability by a competitive mobility-shift assay.

Determination of the impact of DNA damage sites on DNA duplex stability by a competitive mobility-shift assay.
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通过竞争性迁移率变化测定确定 DNA 损伤位点对 DNA 双链体稳定性的影响。

DOI:
10.1006/abio.2001.5353
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发表时间:
2001
期刊:
Analytical biochemistry.
影响因子:
--
通讯作者:
RotiRoti,J
RotiRoti,J
中科院分区:
--
文献类型:
--
作者:
Chen,MS;Laszlo,A;RotiRoti,J

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Materials and methods. The oligonucleotides used for the analysis of the abasic site and 8-oxo-dG were synthesized based on the codon 12 (and surrounding sequence) of KRAS (Fig. 1A)(4) and on the AP-1 binding site of the NF-kappa B gene (Fig. 1B), respectively. The abasic probe was generated by digesting the uracil-containing oligonucleotide with uracil-DNA glycosylase (New England Biolabs) and then labeled with [-32P] ATP using T4 polynucleotide kinase. Probes containing 8-oxo-dG were prepared by direct incorporation
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DOI: 10.1006/abio.1996.0291
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