Functional analysis of the Na+,K+/H+ antiporter PeNHX3 from the tree halophyte Populus euphratica in yeast by model-guided mutagenesis.

Functional analysis of the Na+,K+/H+ antiporter PeNHX3 from the tree halophyte Populus euphratica in yeast by model-guided mutagenesis.
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模型引导诱变对盐生植物胡杨 Na , K /H 逆向转运蛋白 PeNHX3 的功能分析

DOI:
10.1371/journal.pone.0104147
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发表时间:
2014
期刊:
影响因子:
3.7
通讯作者:
Qiu QS
Qiu QS
中科院分区:
综合性期刊3区
文献类型:
--
作者:
Wang L;Feng X;Zhao H;Wang L;An L;Qiu QS

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Na+、K+/H+逆向转运蛋白是H+偶联的共转运蛋白,对细胞内环境的稳定至关重要。胡杨是一种著名的盐生树种,含有6个Na+/H+逆向转运蛋白基因(PeNHX1-6),已被证明在耐盐性中起作用。然而,控制其离子传输的催化机制在很大程度上仍不清楚。以大肠杆菌Na+/H+逆向转运蛋白(ECNhaA)的晶体结构为模板,构建了由胡杨出发的PeNHX3的三维结构。PeNHX3模型显示了典型的TM4-TM11组装,这对离子结合和转运至关重要。PeNHX3的结构遵循“正-内”规律,表现出典型的转运蛋白的物理化学性质。在PeNHX3的TM4-TM11装配区发现了4个保守残基,包括Tyr149、Asn187、Asp188和Arg356。突变分析表明,这些保留的残基是PeNHX3功能所必需的:Asn187和Asp188(形成一个ND基序)控制离子的结合和转运,Tyr149和Arg356补偿TM4-TM11组装中的螺旋偶极。在酵母生长实验中,PeNHX3介导了Na+、K+和Li+的转运。结构域切换分析表明,TM11在Li+转运中起着至关重要的作用。讨论了PeNHX3在离子结合和移位方面的新特点。
Na+,K+/H+ antiporters are H+-coupled cotransporters that are crucial for cellular homeostasis. Populus euphratica, a well-known tree halophyte, contains six Na+/H+ antiporter genes (PeNHX1-6) that have been shown to function in salt tolerance. However, the catalytic mechanisms governing their ion transport remain largely unknown. Using the crystal structure of the Na+/H+ antiporter from the Escherichia coli (EcNhaA) as a template, we built the three-dimensional structure of PeNHX3 from P. euphratica. The PeNHX3 model displays the typical TM4-TM11 assembly that is critical for ion binding and translocation. The PeNHX3 structure follows the ‘positive-inside’ rule and exhibits a typical physicochemical property of the transporter proteins. Four conserved residues, including Tyr149, Asn187, Asp188, and Arg356, are indentified in the TM4-TM11 assembly region of PeNHX3. Mutagenesis analysis showed that these reserved residues were essential for the function of PeNHX3: Asn187 and Asp188 (forming a ND motif) controlled ion binding and translocation, and Tyr149 and Arg356 compensated helix dipoles in the TM4-TM11 assembly. PeNHX3 mediated Na+, K+ and Li+ transport in a yeast growth assay. Domain-switch analysis shows that TM11 is crucial to Li+ transport. The novel features of PeNHX3 in ion binding and translocation are discussed.
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