AnoXcel:: an Anopheles gambiae protein database

AnoXcel:: an Anopheles gambiae protein database
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DOI:
10.1111/j.0962-1075.2004.00503.x
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发表时间:
2004-10-01
影响因子:
2.6
通讯作者:
Louis, C
Louis, C
中科院分区:
农林科学2区
文献类型:
--
作者:
Ribeiro, JMC;Topalis, P;Louis, C

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冈比亚按蚊的蛋白质组被组织在一个超链接的电子表格格式上,每行包含一个蛋白质,每列包含几条信息。每种蛋白质的信息范围包括是否存在指示分泌的信号肽、是否存在跨膜结构域、与几个数据库的相似性、染色体位置以及与其他An的相关性。冈比亚蛋白等。org/),可以从www.anobase.org/ AnoBase/Genes/Ano-Xcel下载或搜索整个电子表格或其片段,由处理蛋白质组子集注释的科学家进行,例如来自转录组、核苷酸微阵列或高通量质谱数据的那些。
The proteome of the mosquito Anopheles gambiae was organized on a hyperlinked spreadsheet format containing one protein per row and several pieces of information in each column. The information for each protein ranges from the presence or absence of signal peptide indicative of secretion, presence of transmembrane domains, similarities to several databases, chromosomal location, and relatedness to other An. gambiae proteins, etc. Hosted by ANOBASE (http://www.anobase. org/), the whole spreadsheet or segments of it can be downloaded or searched from www.anobase.org/ AnoBase/Genes/Ano-Xcel by the scientist dealing with the annotation of proteome subsets such as those deriving from transcriptomes, nucleotide microarrays or high throughput mass spectrometry data.