Multiclass classification of microarray data with repeated measurements: application to cancer.

Multiclass classification of microarray data with repeated measurements: application to cancer.
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DOI:
10.1186/gb-2003-4-12-r83
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发表时间:
2003
期刊:
影响因子:
12.3
通讯作者:
Bumgarner RE
Bumgarner RE
中科院分区:
生物学1区
文献类型:
--
作者:
Yeung KY;Bumgarner RE

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Prediction of the diagnostic category of a tissue sample from its gene-expression profile and selection of relevant genes for class prediction have important applications in cancer research. Uncorrelated shrunken centroid and error-weighted, uncorrelated shrunken centroid algorithms have been developed that are applicable to microarray data with any number of classes. Prediction of the diagnostic category of a tissue sample from its gene-expression profile and selection of relevant genes for class prediction have important applications in cancer research. We have developed the uncorrelated shrunken centroid (USC) and error-weighted, uncorrelated shrunken centroid (EWUSC) algorithms that are applicable to microarray data with any number of classes. We show that removing highly correlated genes typically improves classification results using a small set of genes.
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