MetaboLights: a resource evolving in response to the needs of its scientific community
MetaboLights: a resource evolving in response to the needs of its scientific community
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DOI：
10.1093/nar/gkz1019
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发表时间：
2020-01-08
影响因子：
14.9
通讯作者：
O'Donovan, Claire
中科院分区：
文献类型：
--
作者：
Haug, Kenneth;Cochrane, Keeva;O'Donovan, Claire
MetaboLights是代谢组学研究的数据库，包含原始实验数据和相关元数据。该数据库是跨物种和跨技术的，它涵盖了代谢物结构和它们的参考光谱，以及它们的生物学作用和位置。MetaboLights是一些领先期刊和ELIXIR（欧洲生命科学信息基础设施）推荐的代谢组学存储库。在本文中，我们描述了我们在过去两年中对资源所做的重大更新，以响应代谢组学社区提交的数据数量和多样性的增加。我们更新了网站，最重要的是，我们的提交流程进行了彻底的改革，使我们能够提供一个更加用户友好的提交流程，并促进对可重复性和与其他组学集成的不断增长的需求。代谢组学资源和数据根据embi - ebi的使用条款可通过web通过https:// www.ebi.ac.uk/metabolights和Apache 2.0在Github （https://github.com/EBI-Metabolights/）获得。
MetaboLights is a database for metabolomics studies, their raw experimental data and associated metadata. The database is cross-species and cross-technique and it covers metabolite structures and their reference spectra as well as their biological roles and locations. MetaboLights is the recommended metabolomics repository for a number of leading journals and ELIXIR, the European infrastructure for life science information. In this article, we describe the significant updates that we have made over the last two years to the resource to respond to the increasing amount and diversity of data being submitted by the metabolomics community. We refreshed the website and most importantly, our submission process was completely overhauled to enable us to deliver a far more user-friendly submission process and to facilitate the growing demand for reproducibility and integration with other 'omics. Metabolomics resources and data are available under the EMBL-EBI's Terms of Use via the web at https: //www.ebi.ac.uk/metabolights and under Apache 2.0 at Github (https://github.com/EBI-Metabolights/).