The effects of evolutionary distance on TWINSCAN, an algorithm for pair-wise comparative gene prediction.

The effects of evolutionary distance on TWINSCAN, an algorithm for pair-wise comparative gene prediction.
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DOI:
10.1101/sqb.2003.68.125
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发表时间:
2003
期刊:
Cold Spring Harbor symposia on quantitative biology
影响因子:
--
通讯作者:
M. Wang;J. Buhler;M. Brent
M. Wang;J. Buhler;M. Brent
中科院分区:
其他
文献类型:
--
作者:
M. Wang;J. Buhler;M. Brent

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Figure 1. Conversion of the best local alignment in each region of the target genome (top) into the conservation sequence representation used by TWINSCAN (bottom).(Left) A typical coding region, in which there are no unaligned bases or gaps, and the distances between mismatches tend to be multiples of three.(Right) A typical intron, in which there are unaligned regions, gaps and adjacent mismatches.