Convergence of genes and cellular pathways dysregulated in autism spectrum disorders.

Convergence of genes and cellular pathways dysregulated in autism spectrum disorders.
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自闭症谱系障碍中基因和细胞途径的收敛性。

DOI:
10.1016/j.ajhg.2014.03.018
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发表时间:
2014-05-01
影响因子:
9.8
通讯作者:
Scherer SW
Scherer SW
中科院分区:
生物学1区
文献类型:
--
作者:
Pinto D;Delaby E;Merico D;Barbosa M;Merikangas A;Klei L;Thiruvahindrapuram B;Xu X;Ziman R;Wang Z;Vorstman JA;Thompson A;Regan R;Pilorge M;Pellecchia G;Pagnamenta AT;Oliveira B;Marshall CR;Magalhaes TR;Lowe JK;Howe JL;Griswold AJ;Gilbert J;Duketis E;Dombroski BA;De Jonge MV;Cuccaro M;Crawford EL;Correia CT;Conroy J;Conceição IC;Chiocchetti AG;Casey JP;Cai G;Cabrol C;Bolshakova N;Bacchelli E;Anney R;Gallinger S;Cotterchio M;Casey G;Zwaigenbaum L;Wittemeyer K;Wing K;Wallace S;van Engeland H;Tryfon A;Thomson S;Soorya L;Rogé B;Roberts W;Poustka F;Mouga S;Minshew N;McInnes LA;McGrew SG;Lord C;Leboyer M;Le Couteur AS;Kolevzon A;Jiménez González P;Jacob S;Holt R;Guter S;Green J;Green A;Gillberg C;Fernandez BA;Duque F;Delorme R;Dawson G;Chaste P;Café C;Brennan S;Bourgeron T;Bolton PF;Bölte S;Bernier R;Baird G;Bailey AJ;Anagnostou E;Almeida J;Wijsman EM;Vieland VJ;Vicente AM;Schellenberg GD;Pericak-Vance M;Paterson AD;Parr JR;Oliveira G;Nurnberger JI;Monaco AP;Maestrini E;Klauck SM;Hakonarson H;Haines JL;Geschwind DH;Freitag CM;Folstein SE;Ennis S;Coon H;Battaglia A;Szatmari P;Sutcliffe JS;Hallmayer J;Gill M;Cook EH;Buxbaum JD;Devlin B;Gallagher L;Betancur C;Scherer SW

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罕见的拷贝数变异(CNV)是自闭症谱系障碍(ASDS)的重要风险来源。我们分析了2,446个受ASD影响的家系,证实了受影响组与对照组相比存在过量的基因缺失和复制(1.41倍,p=1.0亿×10−5),并且受影响的受试者携带外显子致病CNV的数量增加,重叠与显性或X连锁自闭症和智能障碍相关的已知基因座(优势比=12.62,p=2.7亿×10−15,∼为自闭症受试者的3%)。致病CNV通常表现出不同的表达能力,包括36个座位上罕见的从头和遗传事件,涉及先前与其他神经发育障碍相关的ASD相关基因(CHD2、HDAC4和GDI1),以及其他基因如SETD5、MIR137和HDAC9。与假设的性别特定的调节因素一致,患有自闭症的女性更有可能患有高穿透性CNV(p=0.017),并且在脆性X综合征蛋白靶标的受试者中也被过度表达(p=0.02)。受新生CNV和/或功能丧失单核苷酸变体影响的基因聚集在与神经元信号和发育、突触功能和染色质调节相关的网络上。
Rare copy-number variation (CNV) is an important source of risk for autism spectrum disorders (ASDs). We analyzed 2,446 ASD-affected families and confirmed an excess of genic deletions and duplications in affected versus control groups (1.41-fold, p = 1.0 × 10−5) and an increase in affected subjects carrying exonic pathogenic CNVs overlapping known loci associated with dominant or X-linked ASD and intellectual disability (odds ratio = 12.62, p = 2.7 × 10−15, ∼3% of ASD subjects). Pathogenic CNVs, often showing variable expressivity, included rare de novo and inherited events at 36 loci, implicating ASD-associated genes (CHD2, HDAC4, and GDI1) previously linked to other neurodevelopmental disorders, as well as other genes such as SETD5, MIR137, and HDAC9. Consistent with hypothesized gender-specific modulators, females with ASD were more likely to have highly penetrant CNVs (p = 0.017) and were also overrepresented among subjects with fragile X syndrome protein targets (p = 0.02). Genes affected by de novo CNVs and/or loss-of-function single-nucleotide variants converged on networks related to neuronal signaling and development, synapse function, and chromatin regulation.
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