Fully automated, sequential tilt-series acquisition with Leginon.

Fully automated, sequential tilt-series acquisition with Leginon.
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DOI:
10.1016/j.jsb.2009.03.019
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发表时间:
2009-07
影响因子:
3
通讯作者:
Jensen, Grant J.
Jensen, Grant J.
中科院分区:
生物学3区
文献类型:
--
作者:
Suloway, Christian;Shi, Jian;Cheng, Anchi;Pulokas, James;Carragher, Bridget;Potter, Clinton S.;Zheng, Shawn Q.;Agard, David A.;Jensen, Grant J.

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电子断层摄影术已成为研究单个细胞、病毒和大分子结构的独特而有力的工具。然而,数据收集耗时,需要昂贵的仪器。为了优化生产率,我们已经将现有的倾斜系列采集程序之一,UCSF Tomo,纳入到开发良好的自动电子显微镜数据收集包Leginon中,以实现全自动,连续的倾斜系列采集。在这里,我们描述了UCSF Tomo如何集成到Leginon中,用户必须做些什么来设置数据收集会话,自动收集如何进行,如何访问和使用有关过程的存档数据,以及如何测试软件。
Electron tomography has become a uniquely powerful tool for investigating the structures of individual cells, viruses, and macromolecules. Data collection is, however, time consuming and requires expensive instruments. To optimize productivity, we have incorporated one of the existing tilt-series acquisition programs, UCSF Tomo, into the well-developed automatic electron microscopy data collection package Leginon to enable fully automatic, sequential tilt series acquisition. Here we describe how UCSF Tomo was integrated into Leginon, what users must do to set up a data collection session, how the automatic collection proceeds, how archived data about the process can be accessed and used, and how the software has been tested.
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