CyanoBase, the genome database for Synechocystis sp strain PCC6803:: status for the year 2000
CyanoBase, the genome database for Synechocystis sp strain PCC6803:: status for the year 2000
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DOI：
10.1093/nar/28.1.72
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发表时间：
2000-01-01
影响因子：
14.9
通讯作者：
Tabata, S
中科院分区：
文献类型：
--
作者：
Nakamura, Y;Kaneko, T;Tabata, S
氰基提供了一个在线资源，用于访问关于蓝藻合胞藻属的基因组信息的数据。对于PCC6803菌株，数据库包含从基因组的整个核苷酸序列推导出的每个蛋白质编码基因的注释、基因分类列表以及关键字和相似性搜索引擎。氰基的核心部分包括从该基因组的整个核苷酸序列推导出的3168个蛋白质基因中的每一个的注释。通过更新相似性搜索结果和引入生物信息学分析的参考文献，每个基因的含量都得到了改进。该数据库现在包括存储和提供实验信息的储存库设施，此外还提供关于每个基因功能的建议。这些信息应该有助于避免不必要的重叠实验，并有助于希望阐明蓝藻基因组上假定基因功能的科学家之间的沟通。氰基目前的网址是http://www.kazusa.or.jp:8080/cyano/.
CyanoBase provides an online resource for access to data on genomic information about the cyanobacterium Synechocystis sp. strain PCC6803, The database contains annotations for each protein-coding gene deduced from the entire nucleotide sequence of the genome, gene classification lists, and keyword and similarity search engines. Core portions of CyanoBase consist of annotations for each of the 3168 protein genes deduced from the entire nucleotide sequence of this genome. The contents of each gene were improved by updating with the results of similarity searches and by introducing references for analysis in bioinformatics. The database now contains repository facilities that store and provide experimental information, in addition to providing proposals for the function of each gene. This information should help to avoid unnecessary, overlapping experiments and should assist communication between scientists who wish to elucidate the function of putative genes on the cyanobacteria genome. The current URL of CyanoBase is http://www.kazusa.or.jp:8080/cyano/.