TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets
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DOI：
10.1093/bioinformatics/btg034
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发表时间：
2003-03-22
期刊：
影响因子：
5.8
通讯作者：
Quackenbush, J
中科院分区：
文献类型：
--
作者：
Pertea, G;Huang, XQ;Quackenbush, J
TGICL是一个用于分析大型表达序列标签（EST）和mRNA数据库的管道，其中序列首先基于成对序列相似性聚类，然后由单个聚类（可选择带有质量值）组装以产生更长，更完整的共识序列。系统支持SMP、PVM等多cpu架构。
TGICL is a pipeline for analysis of large Expressed Sequence Tags (EST) and mRNA databases in which the sequences are first clustered based on pairwise sequence similarity, and then assembled by individual clusters (optionally with quality values) to produce longer, more complete consensus sequences. The system can run on multi-CPU architectures including SMP and PVM.