R/qtl: QTL mapping in experimental crosses

R/qtl: QTL mapping in experimental crosses
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DOI:
10.1093/bioinformatics/btg112
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发表时间:
2003-05-01
期刊:
影响因子:
5.8
通讯作者:
Churchill, GA
Churchill, GA
中科院分区:
生物学3区
文献类型:
--
作者:
Broman, KW;Wu, H;Churchill, GA

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R/qtl是一个可扩展的、相互作用的环境,用于在近交系实验群体中定位数量性状基因座(QTL)。它是作为一个附加软件包的免费提供的统计软件,R,并包括功能估计遗传图谱,识别基因分型错误,并执行单QTL和二维,两个QTL基因组扫描的多种方法,可能包括协变量。
R/qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental populations derived from inbred lines. It is implemented as an add-on package for the freely-available statistical software, R, and includes functions for estimating genetic maps, identifying genotyping errors, and performing single-QTL and two-dimensional, two-QTL genome scans by multiple methods, with the possible inclusion of covariates.