MrBayes 3: Bayesian phylogenetic inference under mixed models

MrBayes 3: Bayesian phylogenetic inference under mixed models
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DOI:
10.1093/bioinformatics/btg180
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发表时间:
2003-08-12
期刊:
影响因子:
5.8
通讯作者:
Huelsenbeck, JP
Huelsenbeck, JP
中科院分区:
生物学3区
文献类型:
--
作者:
Ronquist, F;Huelsenbeck, JP

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Mr Bayes 3结合了不同随机进化模型下不同数据分区或子集的信息,进行了贝叶斯系统发育分析。这允许用户分析由不同数据类型组成的异类数据集--例如形态、核苷酸和蛋白质-并探索各种混合分配的结构化模型-独特的和共享的参数。该程序使用MPI在Macintosh或Unix集群上并行化Metropolis耦合。
MrBayes 3 performs Bayesian phylogenetic analysis combining information from different data partitions or subsets evolving under different stochastic evolutionary models. This allows the user to analyze heterogeneous data sets consisting of different data types-e.g. morphological, nucleotide, and protein- and to explore a wide variety of structured models mixing partition-unique and shared parameters. The program employs MPI to parallelize Metropolis coupling on Macintosh or UNIX clusters.