LIFEdb: a database for functional genomics experiments integrating information from external sources, and serving as a sample tracking system

LIFEdb: a database for functional genomics experiments integrating information from external sources, and serving as a sample tracking system
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DOI:
10.1093/nar/gkh022
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发表时间:
2004-01-01
影响因子:
14.9
通讯作者:
Wiemann, S
Wiemann, S
中科院分区:
生物学2区
文献类型:
--
作者:
Bannasch, D;Mehrle, A;Wiemann, S

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我们已经实现了LIFEdb(http://www.dkfz.de/LIFEdb),将关于由德国cDNA联盟产生和测序的新的人类全长cDNA的信息与功能基因组学和蛋白质组学方法产生的编码蛋白的功能信息联系起来。该数据库还作为一个样本跟踪系统,管理从cDNA到实验读出和数据解释的过程。网络界面使科学界能够结合实验结果探索和可视化带注释的cDNA和ORF的特征,从而帮助揭开具有未知功能的蛋白质的新特征。
We have implemented LIFEdb (http://www.dkfz.de/ LIFEdb) to link information regarding novel human full-length cDNAs generated and sequenced by the German cDNA Consortium with functional information on the encoded proteins produced in functional genomics and proteomics approaches. The database also serves as a sample-tracking system to manage the process from cDNA to experimental read-out and data interpretation. A web interface enables the scientific community to explore and visualize features of the annotated cDNAs and ORFs combined with experimental results, and thus helps to unravel new features of proteins with as yet unknown functions.