Circular Dichroism Spectral Data and Metadata in the Protein Circular Dichroism Data Bank (PCDDB): A Tutorial Guide to Accession and Deposition
Circular Dichroism Spectral Data and Metadata in the Protein Circular Dichroism Data Bank (PCDDB): A Tutorial Guide to Accession and Deposition
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DOI：
10.1002/chir.22050
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发表时间：
2012-09-01
期刊：
影响因子：
2
通讯作者：
Wallace, B. A.
中科院分区：
文献类型：
--
作者：
Janes, Robert W.;Miles, A. J.;Wallace, B. A.
蛋白质圆二色性数据库（PCDDB）是一个基于网络的资源，包含圆二色性（CD）和同步辐射圆二色性光谱和相关的元数据，位于http://pcddb.cryst.bbk.ac.uk。该资源提供了一种免费可用的，用户友好的访问验证CD光谱及其相关实验细节和元数据的方法，从而使该材料的广泛使用和结构生物学，化学和生物信息学社区的新发展成为可能。该资源还使利用光盘作为实验技术的研究人员能够将其数据存储在一个安全的网站上，从中可以轻松检索，从而使他们的结果公开访问，这是世界各地许多赠款资助机构的当前要求，并满足期刊出版物的数据共享要求。本教程为那些希望利用数据库中现有数据的人提供了有关搜索，访问和下载程序的广泛信息，并为那些希望将其数据纳入数据库的人提供了有关创建和验证条目的沉积程序的详细信息，包括对其内容和格式的全面解释。Chirality 24：751763，2012. (c)2012 Wiley Periodicals，Inc.
The Protein Circular Dichroism Data Bank (PCDDB) is a web-based resource containing circular dichroism (CD) and synchrotron radiation circular dichroism spectral and associated metadata located at http://pcddb.cryst.bbk.ac.uk. This resource provides a freely available, user-friendly means of accessing validated CD spectra and their associated experimental details and metadata, thereby enabling broad usage of this material and new developments across the structural biology, chemistry, and bioinformatics communities. The resource also enables researchers utilizing CD as an experimental technique to have a means of storing their data at a secure site from which it is easily retrievable, thereby making their results publicly accessible, a current requirement of many grant-funding agencies world-wide, as well as meeting the data-sharing requirements for journal publications. This tutorial provides extensive information on searching, accessing, and downloading procedures for those who wish to utilize the data available in the data bank, and detailed information on deposition procedures for creating and validating entries, including comprehensive explanations of their contents and formats, for those who wish to include their data in the data bank. Chirality 24:751763, 2012. (c) 2012 Wiley Periodicals, Inc.