Generation of Functional-RNA Arrays by In Vitro Transcription and In Situ RNA Capture for the Detection of RNA-RNA Interactions.

Generation of Functional-RNA Arrays by In Vitro Transcription and In Situ RNA Capture for the Detection of RNA-RNA Interactions.
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通过体外转录和原位 RNA 捕获生成功能性 RNA 阵列,用于检测 RNA-RNA 相互作用。

DOI:
10.1007/978-1-0716-3004-4_13
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发表时间:
2023
期刊:
Methods in molecular biology (Clifton, N.J.)
影响因子:
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通讯作者:
Vincent HA
Vincent HA
中科院分区:
--
文献类型:
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作者:
Vincent HA

文献摘要

相似文献

RNA具有多种重要的细胞功能。这些功能通常需要与其他生物大分子相互作用,通常作为复杂通信网络的一部分。因此,能够分析基于RNA的相互作用的高通量技术是必不可少的。功能性RNA阵列满足了这一需求,提供了并行执行数百种微型分析的能力。在这里,我们描述了一种使用DNA模板阵列的体外转录和原位RNA捕获来产生功能RNA阵列的方法。我们还建议如何将功能RNA阵列应用于研究RNA-RNA相互作用。
RNA performs a wide variety of vital cellular functions. These functions typically require interactions with other biological macromolecules, often as part of an intricate communication network. High-throughput techniques capable of analyzing RNA-based interactions are therefore essential. Functional-RNA arrays address this need, providing the capability of performing hundreds of miniature assays in parallel. Here we describe a method to generate functional-RNA arrays using in vitro transcription of a DNA template array and in situ RNA capture. We also suggest how functional-RNA arrays could be applied to investigating RNA-RNA interactions.