Automatic generation of protein structure cartoons with Pro-origami
Automatic generation of protein structure cartoons with Pro-origami
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DOI：
10.1093/bioinformatics/btr575
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发表时间：
2011-12-01
期刊：
影响因子：
5.8
通讯作者：
Stuckey, Peter J.
中科院分区：
文献类型：
--
作者：
Stivala, Alex;Wybrow, Michael;Stuckey, Peter J.
蛋白质拓扑图是蛋白质结构的2D表示，在理解和分析复杂的蛋白质折叠中特别有用。生成这样的图是图形绘制中的一个主要问题，自动方法通常会导致错误或无法解释的结果。在这里，我们将图表布局的突破应用于蛋白质拓扑图漫画，提供清晰，准确，交互和可编辑的图表，这也是结构搜索方法的接口。
Protein topology diagrams are 2D representations of protein structure that are particularly useful in understanding and analysing complex protein folds. Generating such diagrams presents a major problem in graph drawing, with automatic approaches often resulting in errors or uninterpretable results. Here we apply a breakthrough in diagram layout to protein topology cartoons, providing clear, accurate, interactive and editable diagrams, which are also an interface to a structural search method.