NMR Assignment through Linear Programming.

NMR Assignment through Linear Programming.
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DOI:
10.1007/s10898-021-01004-3
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发表时间:
2022-05
期刊:
Journal of global optimization : an international journal dealing with theoretical and computational aspects of seeking global optima and their applications in science, management and engineering
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核磁共振 (NMR) 光谱是用于蛋白质结构测定的第二大常用技术(仅次于 X 射线晶体学)。该技术的计算挑战涉及解决离散优化问题,该问题将共振频率分配给蛋白质中的每个原子。本文介绍了 LIAN(NMR 线性规划分配),这是一种新颖的线性规划问题公式,可在模拟和实验数据集中产生最先进的结果。
Nuclear Magnetic Resonance (NMR) Spectroscopy is the second most used technique (after X-ray crystallography) for structural determination of proteins. A computational challenge in this technique involves solving a discrete optimization problem that assigns the resonance frequency to each atom in the protein. This paper introduces LIAN (LInear programming Assignment for NMR), a novel linear programming formulation of the problem which yields state-of-the-art results in simulated and experimental datasets.
DOI: 10.1016/j.pnmrs.2008.12.001
发表时间: 2009-08-01
影响因子: 6.1
作者:
Donald, Bruce R.;Martin, Jeffrey
通讯作者: Martin, Jeffrey