Pyrite: A blender plugin for visualizing molecular dynamics simulations using industry‐standard rendering techniques
Pyrite: A blender plugin for visualizing molecular dynamics simulations using industry‐standard rendering techniques
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Pyrite：一个混合器插件，用于使用行业标准渲染技术可视化分子动力学模拟
DOI：
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发表时间：
2018
影响因子：
3
通讯作者：
Jacob D. Durrant
中科院分区：
文献类型：
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作者：
N. Rajendiran;Jacob D. Durrant
分子动力学（MD）模拟为许多生物学机制提供了重要的见解。VMD、Chimera和PyMOL等程序可以生成令人印象深刻的仿真可视化，但它们缺乏电影和视频游戏行业中常见的许多高级渲染算法。相比之下，建模程序Blender包含这些算法，但不能导入MD模拟数据。MD轨迹通常需要数千兆字节的内存/磁盘空间，使Blender导入复杂化。我们提出了Pyrite，一个克服这些限制的Blender插件。Pyrite允许研究人员在Blender中可视化MD模拟，并完全访问Blender的尖端渲染技术。我们希望Pyrite生成的图像能够吸引学生和非专业人士。该插件的副本可在http：//durrantlab.com/pyrite/上获得，根据GNU通用公共许可证第3版的条款发布。© 2017 Wiley Periodicals，Inc.
Molecular dynamics (MD) simulations provide critical insights into many biological mechanisms. Programs such as VMD, Chimera, and PyMOL can produce impressive simulation visualizations, but they lack many advanced rendering algorithms common in the film and video‐game industries. In contrast, the modeling program Blender includes such algorithms but cannot import MD‐simulation data. MD trajectories often require many gigabytes of memory/disk space, complicating Blender import. We present Pyrite, a Blender plugin that overcomes these limitations. Pyrite allows researchers to visualize MD simulations within Blender, with full access to Blender's cutting‐edge rendering techniques. We expect Pyrite‐generated images to appeal to students and non‐specialists alike. A copy of the plugin is available at http://durrantlab.com/pyrite/, released under the terms of the GNU General Public License Version 3. © 2017 Wiley Periodicals, Inc.
影响因子：
14.9
作者：
Rose AS;Hildebrand PW
通讯作者：
Hildebrand PW
影响因子：
4.7
作者：
Closa, Adria;Cordero, David;Moreno, Victor
通讯作者：
Moreno, Victor