RVDB-prot, a reference viral protein database and its HMM profiles.
RVDB-prot, a reference viral protein database and its HMM profiles.
复制标题
DOI：
10.12688/f1000research.18776.1
复制
发表时间：
2019-01-01
期刊：
影响因子：
--
通讯作者：
Eloit, Marc
中科院分区：
文献类型：
--
作者：
Bigot, Thomas;Temmam, Sarah;Eloit, Marc
我们提出RVDB-prot，一个对应于核酸参考病毒数据库RVDB的蛋白质等价物的数据库。蛋白质数据库可以有助于进行更灵敏的蛋白质序列比较。与其同源公共存储库类似，RVDB-prot旨在提供可靠和准确注释的独特条目，同时还包括用于远距离蛋白质搜索的隐马尔可夫模型（HMM）蛋白质谱数据库。
We present RVDB-prot, a database corresponding to the protein equivalent of the nucleic acid reference virus database RVDB. Protein databases can be helpful to perform more sensitive protein sequence comparisons. Similarly to its homologous public repository, RVDB-prot aims to provide reliable and accurately annotated unique entries, while including also an Hidden Markov Model (HMM) protein profiles database for distant protein searching.