Introducing the Brassica Information Portal: Towards integrating genotypic and phenotypic Brassica crop data.
Introducing the Brassica Information Portal: Towards integrating genotypic and phenotypic Brassica crop data.
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DOI：
10.12688/f1000research.11301.2
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发表时间：
2017
期刊：
影响因子：
--
通讯作者：
Jurkowski W
中科院分区：
文献类型：
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作者：
Eckes AH;Gubała T;Nowakowski P;Szymczyszyn T;Wells R;Irwin JA;Horro C;Hancock JM;King G;Dyer SC;Jurkowski W
芸苔属信息门户（BIP）是芸苔属表型数据的集中存储库。该网站提供了与芸苔属作物研究和育种实验相关的性状数据，芸苔属作物被用作油料种子、蔬菜、牲畜饲料和饲料以及生物燃料。一个关键的特点是明确的元数据管理描述种源和实验植物材料之间的关系，以及试验设计和性状描述符。BIP是一个开放访问和开源项目，建立在CropStoreDB的模式上，因此可以为任何作物数据提供性状数据管理策略。新的用户界面和编程提交/检索系统有助于简化研究人员、育种者和其他最终用户的数据访问。BIP为将综合性、跨项目分析应用于芸苔属研究社区生成的数据提供了机会。在这里，我们对存储库的当前状态进行了简短的描述。
The Brassica Information Portal (BIP) is a centralised repository for brassica phenotypic data. The site hosts trait data associated with brassica research and breeding experiments conducted on brassica crops, that are used as oilseeds, vegetables, livestock forage and fodder and for biofuels. A key feature is the explicit management of meta-data describing the provenance and relationships between experimental plant materials, as well as trial design and trait descriptors. BIP is an open access and open source project, built on the schema of CropStoreDB, and as such can provide trait data management strategies for any crop data. A new user interface and programmatic submission/retrieval system helps to simplify data access for researchers, breeders and other end-users. BIP opens up the opportunity to apply integrative, cross-project analyses to data generated by the Brassica Research Community. Here, we present a short description of the current status of the repository.