MZmine: toolbox for processing and visualization of mass spectrometry based molecular profile data
MZmine: toolbox for processing and visualization of mass spectrometry based molecular profile data
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DOI：
10.1093/bioinformatics/btk039
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发表时间：
2006-03-01
期刊：
影响因子：
5.8
通讯作者：
Oresic, M
中科院分区：
文献类型：
--
作者：
Katajamaa, M;Miettinen, J;Oresic, M
新的额外的方法，提出了处理和可视化质谱的分子谱数据，实现了最近推出的MZmine软件的一部分。它们包括新功能和扩展，例如支持mzXML数据格式、对大量文件执行批处理的能力、支持并行处理、使用对齐后峰拾取算法计算峰面积的新方法以及实现Sammon的映射和曲线距离分析以实现数据可视化和探索性分析。可用性：MZmine可在http://mzmine.sourceforge.net/Contact的GNU公共许可下使用：matej. oresic@vtt.fi。
New additional methods are presented for processing and visualizing mass spectrometry based molecular profile data, implemented as part of the recently introduced MZmine software. They include new features and extensions such as support for mzXML data format, capability to perform batch processing for large number of files, support for parallel processing, new methods for calculating peak areas using post-alignment peak picking algorithm and implementation of Sammon's mapping and curvilinear distance analysis for data visualization and exploratory analysis.Availability: MZmine is available under GNU Public license from http://mzmine.sourceforge.net/Contact: matej.oresic@vtt.fi.