Resilience in the proteomics data ecosystem: How the field cares for its data

Resilience in the proteomics data ecosystem: How the field cares for its data
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蛋白质组数据生态系统的弹性:该领域如何关心其数据

DOI:
10.1002/pmic.201300118
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发表时间:
2013
期刊:
影响因子:
3.4
通讯作者:
Martens L
Martens L
中科院分区:
生物学3区
文献类型:
--
作者:
Martens L

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数据的公开传播是生命科学的一个组成部分。在蛋白质组学领域,数据共享在过去几年中已经起飞,这些数据的第一次下游使用迅速变得突出。与此同时,最近NCBI Peptidome和ProteomeCommons Tranche这两个数据库的不幸消亡表明了这种数据收集工作的脆弱性。PRIDE和Peptidome团队为拯救Peptidome数据所做的英勇努力现在已经确保了它们在该领域的持续可用性,并且已经为Tranche提供了替代品。但随着公共数据越来越多地成为生命科学的中心,现在是更详细地了解蛋白质组学数据生态系统的好时机。
The public dissemination of data is an integral part of the life sciences. In the field of proteomics too, data sharing has taken off over the last few years, with the first downstream uses of these data quickly gaining prominence. At the same time, the recent unfortunate demise of two repositories, NCBI Peptidome and ProteomeCommons Tranche, has shown the frailty of such data gathering efforts. Heroic efforts by the PRIDE and Peptidome teams to rescue the Peptidome data have now ensured their continued availability to the field, and alternatives have already been put in place for Tranche. But with public data increasingly at the hub of the life sciences, it is a good time to look at the proteomics data ecosystem in some more detail.
DOI: --
发表时间: 2005
期刊: Proteomics
影响因子: 3.4
作者:
L. Martens;A. Nesvizhskii;H. Hermjakob;M. Adamski;G. Omenn;J. Vandekerckhove;K. Gevaert
通讯作者: K. Gevaert
DOI: 10.1007/s00216-012-5940-8
发表时间: 2012-09-01
影响因子: 4.3
作者:
Gonnelli, Giulia;Hulstaert, Niels;Martens, Lennart
通讯作者: Martens, Lennart