Using the Arabidopsis information resource (TAIR) to find information about Arabidopsis genes.

Using the Arabidopsis information resource (TAIR) to find information about Arabidopsis genes.
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DOI:
10.1002/0471250953.bi0111s30
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发表时间:
2010-06-01
影响因子:
--
通讯作者:
Huala, Eva
Huala, Eva
中科院分区:
其他
文献类型:
--
作者:
Lamesch, Philippe;Dreher, Kate;Huala, Eva

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拟南芥信息资源(TAIR; http://arabidopsis.org)是植物科学家的拟南芥生物学综合网络资源。TAIR策划和整合有关基因,蛋白质,基因功能,基因表达,突变表型,生物材料,如克隆和种子库,遗传标记,遗传和物理图谱,生化途径,基因组组织,突变植物的图像,蛋白质亚细胞定位,出版物和研究社区的信息。各种数据类型广泛地相互关联,可以通过各种基于网络的搜索和显示工具进行访问。本单元主要集中在搜索,浏览,可视化和分析有关拟南芥基因的信息的一些基本方法,并描述了几个新的工具,如新的TAIR基因组浏览器(GBrowse)和TAIR同线性查看器(GBrowse_syn)。我们还描述了如何使用AraCyc挖掘植物代谢途径。
The Arabidopsis Information Resource (TAIR; http://arabidopsis.org) is a comprehensive Web resource of Arabidopsis biology for plant scientists. TAIR curates and integrates information about genes, proteins, gene function, gene expression, mutant phenotypes, biological materials such as clones and seed stocks, genetic markers, genetic and physical maps, biochemical pathways, genome organization, images of mutant plants, protein sub-cellular localizations, publications, and the research community. The various data types are extensively interconnected and can be accessed through a variety of Web-based search and display tools. This unit primarily focuses on some basic methods for searching, browsing, visualizing, and analyzing information about Arabidopsis genes and describes several new tools such as a new TAIR genome browser (GBrowse), and the TAIR synteny viewer (GBrowse_syn). We also describe how to use AraCyc for mining plant metabolic pathways.