Circular retrotransposition products generated by a LINE retrotransposon.

Circular retrotransposition products generated by a LINE retrotransposon.
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DOI:
10.1093/nar/gks859
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发表时间:
2012-11
影响因子:
14.9
通讯作者:
Shao S
Shao S
中科院分区:
生物学2区
文献类型:
--
作者:
Han JS;Shao S

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非长末端重复序列(non-LTR)反转录转座子是存在于整个真核生命域的染色体中的高度丰富的元件。非LTR逆转录转座子的长散布核元件(LINE-1)(L1)进化枝在哺乳动物中特别成功,占人类基因组序列的30-40%。LINE逆转录转座的当前模型,靶向引发逆转录,在染色体整合的终产物中达到高潮。使用非LTR反转录转座的芽殖酵母模型,我们表明,除了产生这些“经典的”,染色体整合的产品,真菌L1进化枝成员(Zorro 3)可以产生丰富的,RNA衍生的附加型产品。遗传学证据表明,这些产物很可能是通过靶向启动逆转录的变异形成的。这些附加型产物是LINE逆转录转座的一种以前看不见的替代命运,并且可能代表了从头逆转录转座的一个意想不到的来源。
Non-long terminal repeat (non-LTR) retrotransposons are highly abundant elements that are present in chromosomes throughout the eukaryotic domain of life. The long interspersed nuclear element (LINE-1) (L1) clade of non-LTR retrotransposons has been particularly successful in mammals, accounting for 30–40% of human genome sequence. The current model of LINE retrotransposition, target-primed reverse transcription, culminates in a chromosomally integrated end product. Using a budding yeast model of non-LTR retrotransposition, we show that in addition to producing these ‘classical’, chromosomally integrated products, a fungal L1 clade member (Zorro3) can generate abundant, RNA-derived episomal products. Genetic evidence suggests that these products are likely to be formed via a variation of target-primed reverse transcription. These episomal products are a previously unseen alternative fate of LINE retrotransposition, and may represent an unexpected source for de novo retrotransposition.
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