Proteins : energy, heat and signal flow
Proteins : energy, heat and signal flow
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DOI：
10.1201/9781420087048
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发表时间：
2009-09
期刊：
影响因子：
--
通讯作者：
D. Leitner;J. Straub
中科院分区：
文献类型：
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作者：
D. Leitner;J. Straub
分子电机中的能量转换 驱动蛋白电机的能量平衡和动力学，Changbong Hyeon 和 Jose N. Onuchic 分子电机中的机械化学耦合：来自肌球蛋白电机领域分子模拟的见解，Haibo Yu、Yang Yang、Liang Ma 和 Gang Cui 驱动蛋白和动力蛋白的化学机械耦合机制，Yiqin Gau 和 Qiang Shao电子转移反应与质子易位相结合：细胞色素氧化酶、质子泵和生物能量转导，Alexei Stuchebrukhov 蛋白质中的振动能量流：基于分子动力学的方法蛋白质的分子动力学模拟：非谐动力学的两种模型，Akinori Kidera、Kei Moritsugu、Yasuhiro Matsunaga 和 Hiroshi Fujisaki 光感受器蛋白质中的能量流路径，Takahisa Yamato 肽中光诱导能量流的非平衡分子动力学模拟：理论与实验的结合，Phuong H. Nguyen、Peter Hamm 和 Gerhard Stock 通过整体分子动力学模拟进行蛋白质能量流分析：时间分辨振动分析和表面 Kirkwood-Buff 理论、Masataka Nagaoka、Isseki Yu 和Masayoshi Takayanagi 蛋白质和纳米结构中的振动能量流：基于正则模式的方法蛋白质中的定向能量漏斗：从结构到功能，Yong Zhang 和 John E. Straub 用于研究生物分子振动的极简网络模型，Mingyang Lu 和jianpeng Ma 蛋白质中的热传递，David M. Leitner 纳米结构中的热传递，Dvira Segal 构象蛋白质管、漏斗和里程碑中的转变和反应路径搜索，Ron Elber、Krzysztof Kuczera 和 Gouri S. Jas 肽和蛋白质结构转化的途径和速率，David J. Wales、Joanne M. Carr、Mey Khalili、Vanessa K. de Souza、Birgit Strodel 和 Chris S. Whittleston 能量流和整体中的变构，Vincent J. Hilser 和 Steven T. Whitten 耦合蛋白质和水动力学的分子动力学模拟研究，Douglas J. Tobias、Neelanjana Sengupta 和 Mounir Tarek 索引
ENERGY TRANSDUCTION IN MOLECULAR MOTORS Energy Balance and Dynamics of Kinesin Motors, Changbong Hyeon and Jose N. Onuchic Mechanochemical Coupling in Molecular Motors: Insights from Molecular Simulations of the Myosin Motor Domain, Haibo Yu, Yang Yang, Liang Ma, and Qiang Cui The Chemomechanical Coupling Mechanisms of Kinesin and Dynein, Yi Qin Gao and Qiang Shao Electron Transfer Reactions Coupled with Proton Translocation: Cytochrome Oxidase, Proton Pumps, and Biological Energy Transduction, Alexei Stuchebrukhov VIBRATIONAL ENERGY FLOW IN PROTEINS: MOLECULAR DYNAMICS-BASED METHODS Molecular Dynamics Simulation of Proteins: Two Models of Anharmonic Dynamics, Akinori Kidera, Kei Moritsugu, Yasuhiro Matsunaga, and Hiroshi Fujisaki Energy Flow Pathways in Photoreceptor Proteins, Takahisa Yamato Nonequilibrium Molecular Dynamics Simulation of Photoinduced Energy Flow in Peptides: Theory Meets Experiment, Phuong H. Nguyen, Peter Hamm, and Gerhard Stock Energy Flow Analysis in Proteins via Ensemble Molecular Dynamics Simulations: Time-Resolved Vibrational Analysis and Surficial Kirkwood-Buff Theory, Masataka Nagaoka, Isseki Yu, and Masayoshi Takayanagi VIBRATIONAL ENERGY FLOW IN PROTEINS AND NANOSTRUCTURES: NORMAL MODE-BASED METHODS Directed Energy Funneling in Proteins: From Structure to Function, Yong Zhang and John E. Straub A Minimalist Network Model for Studying Biomolecular Vibration, Mingyang Lu and Jianpeng Ma Heat Transport in Proteins, David M. Leitner Heat Transfer in Nanostructures, Dvira Segal CONFORMATIONAL TRANSITIONS AND REACTION PATH SEARCHES IN PROTEINS Tubes, Funnels, and Milestones, Ron Elber, Krzysztof Kuczera, and Gouri S. Jas Pathways and Rates for Structural Transformations of Peptides and Proteins, David J. Wales, Joanne M. Carr, Mey Khalili, Vanessa K. de Souza, Birgit Strodel, and Chris S. Whittleston Energy Flow and Allostery in an Ensemble, Vincent J. Hilser and Steven T. Whitten Molecular Dynamics Simulation Studies of Coupled Protein and Water Dynamics, Douglas J. Tobias, Neelanjana Sengupta, and Mounir Tarek Index