Using explicitly represented biological relationships for database navigation and searching via the World-Wide Web.

Using explicitly represented biological relationships for database navigation and searching via the World-Wide Web.
复制标题

使用明确表示的生物关系通过万维网进行数据库导航和搜索。

DOI:
10.1093/bioinformatics/13.3.281
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发表时间:
1997
期刊:
Computer applications in the biosciences : CABIOS
影响因子:
--
通讯作者:
Miller,PL
Miller,PL
中科院分区:
--
文献类型:
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作者:
Panzer,S;Cooley,L;Miller,PL

文献摘要

相似文献

动机:万维网上的生物数据库和它们之间的超文本链接的日益增加的可用性,使丰富的信息很容易获得的生物学家。额外的检索能力,可以通过存储明确指定的不同实体之间的生物学关系作为离散的databaseentries.Results:我们已经建立了CySPID,一个原型数据库的细胞骨架,探索明确表示生物学关系的方法。存储的关系与其他检索到的信息一起沿着显示,可用于建立到相关实体的超链接,并可用于搜索具有指定属性的实体。CySPID是可扩展的,因为可以在不改变数据库模式的情况下创建新类型的关系。可用性:CySPID可供公众使用(http://ycmi.med.yale.edu/cyspid/)。CySPID使用的CGI脚本可根据要求提供。
Motivation: The increasing availability of biological databases on the World-Wide Web and hypertext links between them has made a wealth of information easily accessible to biologists. Additional retrieval capabilities can be achieved by storing explicitly specified biological relationships between different entities as discrete database entries.Results: We have built CySPID, a prototype database about the cytoskeleton that explores the approach of explicitly representing biological relationships. The stored relationships are displayed along with other retrieved information, can be used to make hyperlinks to related entities, and can be used to search for entitites with specified properties. CySPID is extensible in that new types of relationships may be created without altering the database schema.Availability: CySPID is available for public use (http://ycmi.med.yale.edu/cyspid/). The CGI scripts used by CySPID are available upon request.