Strain-specific and pooled genome sequences for populations of Drosophila melanogaster from three continents.
Strain-specific and pooled genome sequences for populations of Drosophila melanogaster from three continents.
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DOI：
10.12688/f1000research.6090.1
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发表时间：
2015
期刊：
影响因子：
--
通讯作者：
Haddrill PR
中科院分区：
文献类型：
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作者：
Bergman CM;Haddrill PR
为了促进我们对自然界中基因组序列变异的进化力量的普遍理解，我们对来自三大洲的50个同雌株系和6个黑腹果蝇种群的合并样本进行了基因组测序。对原始和参考映射读数的分析表明这些基因组序列数据的质量非常高。这些样本的预测和实验确定的沃尔巴克氏体感染状态的比较表明，菌株或样本交换不太可能发生在这些数据的生成。基因组序列可在欧洲核苷酸档案馆以登录号ERP009059免费获得。异雌品系可以从果蝇物种储备中心获得。
To contribute to our general understanding of the evolutionary forces that shape variation in genome sequences in nature, we have sequenced genomes from 50 isofemale lines and six pooled samples from populations of Drosophila melanogaster on three continents. Analysis of raw and reference-mapped reads indicates the quality of these genomic sequence data is very high. Comparison of the predicted and experimentally-determined Wolbachia infection status of these samples suggests that strain or sample swaps are unlikely to have occurred in the generation of these data. Genome sequences are freely available in the European Nucleotide Archive under accession ERP009059. Isofemale lines can be obtained from the Drosophila Species Stock Center.