Developing a COVID-19 mortality risk prediction model when individual-level data are not available

Developing a COVID-19 mortality risk prediction model when individual-level data are not available
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DOI:
10.1038/s41467-020-18297-9
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发表时间:
2020-09-07
影响因子:
16.6
通讯作者:
Dagan, Noa
Dagan, Noa
中科院分区:
综合性期刊1区
文献类型:
--
作者:
Barda, Noam;Riesel, Dan;Dagan, Noa

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在COVID-19大流行病上,当尚未获得COVID-19患者的个别级别数据时,已经需要风险预测因子来支持预防和治疗决策。在这里,我们报告了一种混合策略来创建这样的预测因子,结合了基线严重的呼吸道感染风险预测因子和一种后处理方法,以校准预测为报道的COVID-19 COVID-19病例效率率。随着COVID-19患者队列的积累,该预测因子得到了良好的歧视(接收器操作特征曲线下的面积为0.943)和校准(与基线预测指标相比明显改善)。在5%的风险阈值下,有15%的患者被标记为高风险,敏感性为88%。因此,我们证明,即使在流行病的大流行病开始时,战争的雾气也笼罩在战争中,也可以提供有用的风险预测因子,该预测因素现在已在大型医疗保健组织中广泛使用。
At the COVID-19 pandemic onset, when individual-level data of COVID-19 patients were not yet available, there was already a need for risk predictors to support prevention and treatment decisions. Here, we report a hybrid strategy to create such a predictor, combining the development of a baseline severe respiratory infection risk predictor and a post-processing method to calibrate the predictions to reported COVID-19 case-fatality rates. With the accumulation of a COVID-19 patient cohort, this predictor is validated to have good discrimination (area under the receiver-operating characteristics curve of 0.943) and calibration (markedly improved compared to that of the baseline predictor). At a 5% risk threshold, 15% of patients are marked as high-risk, achieving a sensitivity of 88%. We thus demonstrate that even at the onset of a pandemic, shrouded in epidemiologic fog of war, it is possible to provide a useful risk predictor, now widely used in a large healthcare organization.