SPIRE: The SPIDER Reconstruction Engine
SPIRE: The SPIDER Reconstruction Engine
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DOI：
10.1016/j.jsb.2006.07.019
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发表时间：
2007-01-01
影响因子：
3
通讯作者：
Frank, Joachim
中科院分区：
文献类型：
--
作者：
Baxter, William T.;Leith, ArDean;Frank, Joachim
SPIRE是一个Python程序，用于使用户与电子显微镜重建项目的图像处理系统Spider的交互现代化。SPIRE为Spider提供了图形用户界面(GUI)，用于执行Spider命令的批处理文件。它还允许用户通过显示上次运行的批处理文件以及生成的数据文件来快速查看项目的状态。SPIRE通过配置文件处理Spider编程环境的灵活性：用XML标记的文档描述批处理文件、目录树和给定类型重建项目的图形用户界面表示。它还提供连接到实验室数据库的能力，用于在项目开始时下载批处理文件所需的参数，并在项目结束时上载重建结果。(C)2006 Elsevier Inc.保留所有权利。
SPIRE is a Python program written to modernize the user interaction with SPIDER, the image processing system for electron microscopical reconstruction projects. SPIRE provides a graphical user interface (GUI) to SPIDER for executing batch files of SPIDER commands. It also lets users quickly view the status of a project by showing the last batch files that were run, as well as the data files that were generated. SPIRE handles the flexibility of the SPIDER programming environment through configuration files: XML-tagged documents that describe the batch files, directory trees, and presentation of the GUI for a given type of reconstruction project. It also provides the capability to connect to a laboratory database, for downloading parameters required by batch files at the start of a project, and uploading reconstruction results at the end of a project. (c) 2006 Elsevier Inc. All rights reserved.