FramePlot: a new implementation of the Frame analysis for predicting protein-coding regions in bacterial DNA with a high G plus C content
FramePlot: a new implementation of the Frame analysis for predicting protein-coding regions in bacterial DNA with a high G plus C content
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DOI：
10.1111/j.1574-6968.1999.tb13576.x
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发表时间：
1999-05-15
影响因子：
2.1
通讯作者：
Hotta, K
中科院分区：
文献类型：
--
作者：
Ishikawa, J;Hotta, K
FramePlot是一种基于网络的工具，用于预测G+C含量较高的细菌DNA中的蛋白质编码区，例如链霉菌。图形输出很容易区分蛋白质编码区和非编码区。该图是一张可点击的地图。点击ORF不仅提供了核苷酸序列，还提供了其推导的氨基酸序列。然后可以将这些序列与互联网上的NCBI序列数据库进行比较。该项目可在http://www.nih.go.jp/-jun/cgi-bin/frameplot.pl.上免费获取，用于学术目的(C)1999年欧洲微生物学会联合会。爱思唯尔科学公司出版。版权所有。
FramePlot is a web-based tool for predicting protein-coding regions in bacterial DNA with a high G+C content, such as Streptomyces. The graphical output provides for easy distinction of protein-coding regions from non-coding regions. The plot is a clickable map. Clicking on an ORF provides not only the nucleotide sequence but also its deduced amino acid sequence. These sequences can then be compared to the NCBI sequence database over the Internet. The program is freely available for academic purposes at http://www.nih.go.jp/-jun/cgi-bin/frameplot.pl. (C) 1999 Federation of European Microbiological Societies. Published by Elsevier Science B.V. All rights reserved.