Expressed sequence tags: analysis and annotation.

Expressed sequence tags: analysis and annotation.
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表达的序列标签:分析和注释。

DOI:
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发表时间:
2004
影响因子:
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通讯作者:
M. Blaxter
M. Blaxter
中科院分区:
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文献类型:
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作者:
J. Parkinson;M. Blaxter

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Expressed sequence tags (ESTs) present a special set of problems for bioinformatic analysis. They are partial and error-prone, and large datasets can have significant internal redundancy. To facilitate analysis of small EST datasets from in-house projects, we present an integrated "pipeline" of tools that take EST data from sequence trace to database submission. These tools also can be used to provide clustering of ESTs into putative genes and to annotate these genes with preliminary sequence similarity searches. The systems are written to use the public-domain LINUX environment and other openly available analytical tools.
DOI: 10.1016/s1471-4922(03)00132-6
发表时间: 2003-07
影响因子: 9.6
作者:
J. Parkinson;M. Mitreva;N. Hall;M. Blaxter;J. McCarter
通讯作者: J. Parkinson;M. Mitreva;N. Hall;M. Blaxter;J. McCarter
DOI: 10.1101/gr.9.9.868
发表时间: 1999-09-01
期刊: GENOME RESEARCH
影响因子: 7
作者:
Huang, XQ;Madan, A
通讯作者: Madan, A