SmashCommunity: a metagenomic annotation and analysis tool
SmashCommunity: a metagenomic annotation and analysis tool
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DOI：
10.1093/bioinformatics/btq536
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发表时间：
2010-12-01
期刊：
影响因子：
5.8
通讯作者：
Bork, Peer
中科院分区：
文献类型：
--
作者：
Arumugam, Manimozhiyan;Harrington, Eoghan D.;Bork, Peer
SmashCommunity是一个独立的元基因组注释和分析管道，适用于来自Sanger和454测序技术的数据。它支持最先进的软件，用于基本的元基因组任务，如组装和基因预测。它提供了工具来估计元基因组的定量系统发育和功能组成，比较多个元基因组的组成，并产生这种分析的直观直观表示。
SmashCommunity is a stand-alone metagenomic annotation and analysis pipeline suitable for data from Sanger and 454 sequencing technologies. It supports state-of-the-art software for essential metagenomic tasks such as assembly and gene prediction. It provides tools to estimate the quantitative phylogenetic and functional compositions of metagenomes, to compare compositions of multiple metagenomes and to produce intuitive visual representations of such analyses.