Characterization of thirteen single nucleotide polymorphism markers in the sea cucumber (Apostichopus japonicus)

Characterization of thirteen single nucleotide polymorphism markers in the sea cucumber (Apostichopus japonicus)
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DOI:
10.1007/s12686-010-9270-x
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发表时间:
2010-09-01
影响因子:
1.1
通讯作者:
Kong, Ling-Feng
Kong, Ling-Feng
中科院分区:
环境科学与生态学4区
文献类型:
--
作者:
Sun, Wen-Jing;Li, Qi;Kong, Ling-Feng

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我们描述了商业上重要的海参 (Apostichopus japonicus) 中的 13 个单核苷酸多态性 (SNP)。所有位点都有两个等位基因,次要等位基因频率范围为 0.103 至 0.487。观察到的和预期的杂合度范围为 0.154 至 0.769 和 0.187 至 0.506。这些是为描绘海参种群结构而开发的首批 SNP,将为目前可用的遗传标记提供有用的补充。
We describe 13 single nucleotide polymorphisms (SNPs) in a commercially important sea cucumber (Apostichopus japonicus). All loci had two alleles and the minor allele frequency ranged from 0.103 to 0.487. The observed and expected heterozygosities ranged from 0.154 to 0.769 and from 0.187 to 0.506. These are the first SNPs developed for delineating population structure in the sea cucumber and will provide a useful complement to currently available genetic markers.