NetworkView: 3D display and analysis of protein•RNA interaction networks
NetworkView: 3D display and analysis of protein•RNA interaction networks
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DOI：
10.1093/bioinformatics/bts546
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发表时间：
2012-11-15
期刊：
影响因子：
5.8
通讯作者：
Luthey-Schulten, Zaida
中科院分区：
文献类型：
--
作者：
Eargle, John;Luthey-Schulten, Zaida
NetworkView是一个用于显示和分析蛋白质的应用程序。来自结构和/或动力学的RNA相互作用网络。这些网络通常将单个蛋白质残基和核酸单体建模为节点，将它们的成对接触建模为具有相关权重的边。NetworkView将网络投影到底层的3D分子结构上，从而使网络的可视化和分析可以与物理和生物特性相结合。NetworkView是作为分子可视化软件VMD的一个插件实现的。
NetworkView is an application for the display and analysis of protein. RNA interaction networks derived from structure and/or dynamics. These networks typically model individual protein residues and nucleic acid monomers as nodes and their pairwise contacts as edges with associated weights. NetworkView projects the network onto the underlying 3D molecular structure so that visualization and analysis of the network can be coupled to physical and biological properties. NetworkView is implemented as a plugin to the molecular visualization software VMD.