A nutrigenomics database - integrated repository for publications and associated microarray data in nutrigenomics research

A nutrigenomics database - integrated repository for publications and associated microarray data in nutrigenomics research
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DOI:
10.1079/bjn20051536
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发表时间:
2005-10-01
影响因子:
3.6
通讯作者:
Kato, H
Kato, H
中科院分区:
医学3区
文献类型:
--
作者:
Saito, K;Arai, S;Kato, H

文献摘要

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在营养基因组学(nutrigenomics)领域的微阵列数据正在迅速积累的当前情况下,迫切需要一个有效的数据基础设施,以支持研究工作流程。我们已经建立了一个基于网络的,在营养基因组学领域的出版物和芯片表达数据的集成数据库。注册的数据包括到外部数据库的链接,例如国家生物技术信息中心的PubMed和包含符合微阵列实验的微阵列表达数据的最小信息的公共微阵列数据库。使用这个数据库,所有创建的数据集将得到有效利用,并与其他研究人员共享。该数据库建立在一个开放源码数据库系统上,可通过万维网(http://a-yo5.ch.a.u-tokyo.ac.jp/index.phtml)免费查阅。
In the current situation where microarray data in the field of nutritional genomics (nutrigenomics) are accumulating rapidly, there is imminent need for an efficient data infrastructure to support research workflow. We have established a web-based, integrated database of the publications and microarray expression data in the field of nutrigenomics. The registered data include links to external databases such as PubMed of the National Center for Biotechnology Information and public microarray databases that contain Minimum Information About a Microarray Experiment-compliant microarray expression data. Using this database, all data sets created will be effectively utilized and shared with other researchers. This database is built on an open-source database system and is freely accessible via the World Wide Web (http://a-yo5.ch.a.u-tokyo.ac.jp/index.phtml).