TreeSnatcher: coding trees from images
TreeSnatcher: coding trees from images
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DOI：
10.1093/bioinformatics/btm438
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发表时间：
2007-12-15
期刊：
影响因子：
5.8
通讯作者：
von Haeseler, Arndt
中科院分区：
文献类型：
--
作者：
Laubach, Thomas;von Haeseler, Arndt
TreeSnatcher是一个由图形用户界面驱动的Java应用程序，用于半自动识别像素图像中的多分支系统发育树。该程序接受图像文件作为输入，并分析所描绘的树的拓扑和度量。该分析使用图像分析中的算法分多个阶段进行。最后，TreeSnatcher生成一个Newick树代码，该代码表示树结构，可选地包括分支长度。TreeSnatcher可以在几秒钟内处理100片或更多叶子的树。
TreeSnatcher is a GUI-driven JAVA application for the semi-automatic recognition of multifurcating phylogenetic trees in pixel images. The program accepts an image file as input and analyzes the topology and the metrics of a tree depicted. The analysis is carried out in a multiple-stage process using algorithms from image analysis. In the end, TreeSnatcher produces a Newick tree code that represents the tree structure optionally including branch lengths. TreeSnatcher can process trees with 100 leaves or more in a few seconds.