The foundational model of anatomy in OWL: Experience and perspectives
The foundational model of anatomy in OWL: Experience and perspectives
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DOI：
10.1016/j.websem.2006.05.007
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发表时间：
2006-09-01
影响因子：
2.5
通讯作者：
Bodenreider, Olivier
中科院分区：
文献类型：
--
作者：
Golbreich, Christine;Zhang, Songmao;Bodenreider, Olivier
我们提出的方法开发迁移的基础模型的解剖（FMA）从其表示与框架在Proteege到其逻辑表示在OWL和我们的经验，在推理it.Despite广泛使用的元类Protege，它被证明是可能的转换FMA从Protege到OWL DL，同时捕捉其大部分的原始功能。转换依赖于一组转换和丰富规则，这些规则通过灵活的选项实现。不出所料，在OWL中使用FMA进行推理被证明是一个真实的挑战，因为它的庞大规模和复杂性，并在时间和内存需求方面提出了重大的推理问题。然而，Racer已经成功地处理了各种较小的版本。查明了一些不一致之处，并对若干类别进行了重新分类。到目前为止所获得的结果显示OWL DL的优势，框架，更普遍的是，有用的DL推理机的建设和维护大规模的生物医学本体的未来语义Web。(C)2006年爱思唯尔B。V.保留所有权利。
We present the method developed for migrating the Foundational Model of Anatomy ( FMA) from its representation with frames in Prot e eg e to its logical representation in OWL and our experience in reasoning with it. Despite the extensive use of metaclasses in Protege, it proved possible to convert the FMA from Protege into OWL DL, while capturing most of its original features. The conversion relies on a set of translation and enrichment rules implemented with flexible options. Unsurprisingly, reasoning with the FMA in OWL proved to be a real challenge, due to its sheer size and complexity, and raised significant inference problems in terms of time and memory requirements. However, various smaller versions have been successfully handled by Racer. Some inconsistencies were identified and several classes reclassified. The results obtained so far show the advantage of OWL DL over frames and, more generally, the usefulness of DLs reasoners for building and maintaining the large- scale biomedical ontologies of the future Semantic Web. (C) 2006 Elsevier B. V. All rights reserved.