Ten simple rules for making a vocabulary FAIR.
Ten simple rules for making a vocabulary FAIR.
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DOI：
10.1371/journal.pcbi.1009041
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发表时间：
2021-06
影响因子：
4.3
通讯作者：
Marinescu MC
中科院分区：
文献类型：
--
作者：
Cox SJD;Gonzalez-Beltran AN;Magagna B;Marinescu MC
我们提出了10个简单的规则，支持转换的遗留词汇表，一个列表中的条款，在一个基于打印的词汇表或在一个表中无法访问使用Web标准到一个公平的词汇。发布FAIR词汇表可能有各种途径，但我们特别强调为每个术语或概念提供全球唯一可解析标识符的目标。当解析单个网络标识符时，应返回概念的标准表示，使用SKOS或OWL，以基于RDF的表示形式进行序列化，以供机器交换，并以网页形式供人类使用。提供了词汇表和术语元数据的指导方针，以及开发和维护注意事项。这些规则被安排为一个逐步的配方，用于基于遗留词汇表创建FAIR词汇表。通过遵循这些规则，您可以实现将遗留词汇表转换为独立的FAIR词汇表的结果，该词汇表可用于明确的数据注释。这反过来又提高了数据互操作性并实现了数据集成。我们提出了10个简单的规则，支持转换一个列表的条款目前无法使用Web标准到符合公平原则的词汇表-可查找，可扩展，可互操作和可重用。在FAIR词汇表中，每个术语都有自己的持久网络标识符，其定义可以以人类和标准机器可读的格式下载。其目标是使术语能够在技术数据集中明确引用，无论是在数据集描述中，还是在数据中的各个字段中，以便可以发现和集成数据。这些规则考虑了术语管理的安排，以及与将（通常）基于印刷的形式转换为基于标准的知识表示有关的技术方面。这些规则是按照在转换过程中应考虑的顺序提出的。
We present ten simple rules that support converting a legacy vocabulary—a list of terms available in a print-based glossary or in a table not accessible using web standards—into a FAIR vocabulary. Various pathways may be followed to publish the FAIR vocabulary, but we emphasise particularly the goal of providing a globally unique resolvable identifier for each term or concept. A standard representation of the concept should be returned when the individual web identifier is resolved, using SKOS or OWL serialised in an RDF-based representation for machine-interchange and in a web-page for human consumption. Guidelines for vocabulary and term metadata are provided, as well as development and maintenance considerations. The rules are arranged as a stepwise recipe for creating a FAIR vocabulary based on the legacy vocabulary. By following these rules you can achieve the outcome of converting a legacy vocabulary into a standalone FAIR vocabulary, which can be used for unambiguous data annotation. In turn, this increases data interoperability and enables data integration. We present ten simple rules that support converting a list of terms not currently accessible using web standards into a vocabulary conforming to the FAIR principles–Findable, Accessible, Interoperable and Reusable. In a FAIR vocabulary each term has its own persistent web-identifier, and its definition can be downloaded in both human- and standard machine-readable formats. The goal is to enable terminology to be unambiguously cited within technical datasets, in both the dataset description, or individual fields within the data, so that data can be discovered and integrated. The rules consider arrangements for governance of a terminology alongside the technical aspects related to conversion of (typically) print-based forms to standards-based knowledge representations. The rules are presented in the sequence in which they should be considered in a conversion process.
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影响因子：
2.5
作者：
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通讯作者：
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影响因子：
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作者：
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作者：
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