Bond Graph Representation of Chemical Reaction Networks

Bond Graph Representation of Chemical Reaction Networks
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DOI:
10.1109/tnb.2018.2876391
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发表时间:
2018-10-01
影响因子:
3.9
通讯作者:
Crampin, Edmund J.
Crampin, Edmund J.
中科院分区:
生物学3区
文献类型:
--
作者:
Gawthrop, Peter;Crampin, Edmund J.

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键合图法和化学反应网络法分别用于生物分子系统的建模。本文通过对络合物的化学反应网络概念的键合图解释,将这两种方法结合在一起。封闭和开放系统都进行了讨论。该方法是使用一个简单的酶催化反应和跨膜转运。
The Bond Graph approach and the Chemical Reaction Network approach for modeling the biomolecular systems were developed independently. This paper brings together the two approaches by providing a bond graph interpretation of the chemical reaction network concept of complexes. Both closed and open systems are discussed. The method is illustrated using a simple enzyme-catalyzed reaction and a trans-membrane transporter.