The international rice information system. a platform for meta-analysis of rice crop data

The international rice information system. a platform for meta-analysis of rice crop data
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DOI:
10.1104/pp.105.063438
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发表时间:
2005-10-01
期刊:
影响因子:
7.4
通讯作者:
Cosico, AB
Cosico, AB
中科院分区:
生物学1区
文献类型:
--
作者:
McLaren, CG;Bruskiewich, RM;Cosico, AB

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模棱两可的种质鉴定;追踪血统信息的困难;遗传资源,表征,繁殖,评估和利用数据之间缺乏整合是开发知识密集型作物改进计划的限制。为了解决这些限制,国际作物信息系统(www.icis.cgiar.org),一种用于管理和集成任何农作物的遗传资源和作物改善的全球信息的数据库系统,是由遗传资源专家,作物科学家开发的,以及与国际农业研究和合作伙伴咨询小组相关的信息技术人员。国际水稻信息系统(www.iris.irri.org)是国际作物信息系统的大米(Oryza物种)实施。现在,正在将新组件添加到国际水稻信息系统中,以处理水稻功能基因组数据的多样性,包括基因组序列数据,分子遗传数据,表达数据和蛋白质组学信息。用户通过独立程序和Web界面在数据库中访问信息,这些程序为具有不同兴趣的研究人员提供了专门的应用程序和定制视图。
Ambiguous germplasm identification; difficulty in tracing pedigree information; and lack of integration between genetic resources, characterization, breeding, evaluation, and utilization data are constraints in developing knowledge-intensive crop improvement programs. To address these constraints, the International Crop Information System (www.icis.cgiar.org), a database system for the management and integration of global information on genetic resources and crop improvement for any crop, was developed by genetic resource specialists, crop scientists, and information technicians associated with the Consultative Group for International Agricultural Research and collaborative partners. The International Rice Information System (www.iris.irri.org) is the rice (Oryza species) implementation of the International Crop Information System. New components are now being added to the International Rice Information System to handle the diversity of rice functional genomics data including genomic sequence data, molecular genetic data, expression data, and proteomic information. Users access information in the database through stand-alone programs and Web interfaces, which offer specialized applications and customized views to researchers with different interests.