AGScan: a pluggable microarray image quantification software based on the ImageJ library
AGScan: a pluggable microarray image quantification software based on the ImageJ library
复制标题
DOI：
10.1093/bioinformatics/btl564
复制
发表时间：
2007-01-15
期刊：
影响因子：
5.8
通讯作者：
Klopp, Ch.
中科院分区：
文献类型：
--
作者：
Cathelin, R.;Lopez, F.;Klopp, Ch.
Many different programs are available to analyze microarray images. Most programs are commercial packages, some are free. In the latter group only few propose automatic grid alignment and batch mode. More often than not a program implements only one quantification algorithm. AGScan is an open source program that works on all major platforms. It is based on the ImageJ library [Rasband (1997-2006)] and offers a plug-in extension system to add new functions to manipulate images, align grid and quantify spots. It is appropriate for daily laboratory use and also as a framework for new algorithms.
