Telescope: an interactive tool for managing large-scale analysis from mobile devices.
Telescope: an interactive tool for managing large-scale analysis from mobile devices.
复制标题
Telescope：一种用于管理移动设备大规模分析的交互式工具。
DOI：
10.1093/gigascience/giz163
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发表时间：
2020
期刊：
影响因子：
9.2
通讯作者：
Mangul,Serghei
中科院分区：
文献类型：
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作者：
Brito,JaquelineJ;Mosqueiro,Thiago;Rotman,Jeremy;Xue,Victor;Chapski,DouglasJ;laHoz,JuanDe;Matias,Paulo;Martin,LanaS;Zelikovsky,Alex;Pellegrini,Matteo;Mangul,Serghei
背景在当今的大数据世界中，计算分析已成为生物医学研究的关键驱动力。高性能的计算设施能够处理大量的数据，但往往缺乏一个易于使用的界面，以指导用户通过平板电脑或智能手机在监督和调整生物信息学分析。ResultsTo解决这一差距，我们提出了望远镜，一种新的工具，接口与高性能的计算集群提供一个直观的用户界面，用于控制和监测生物信息学分析的实时。通过利用上一代技术，现在无处不在的大多数研究人员（如智能手机），望远镜提供了一个友好的用户体验和管理conectivity和加密hoods.ConclusionsTelescope有助于减轻湿和计算实验室在当代生物学之间的数字鸿沟。通过用户体验提供方便和易用性，而不依赖于计算集群的专业知识，Telescope可以帮助研究人员关闭生物信息学和实验工作之间的反馈回路，同时对计算工具的性能影响最小。望远镜可以在https://github.com/Mangul-Lab-USC/telescope上免费获得。
BackgroundIn today's world of big data, computational analysis has become a key driver of biomedical research. High-performance computational facilities are capable of processing considerable volumes of data, yet often lack an easy-to-use interface to guide the user in supervising and adjusting bioinformatics analysis via a tablet or smartphone.ResultsTo address this gap we proposed Telescope, a novel tool that interfaces with high-performance computational clusters to deliver an intuitive user interface for controlling and monitoring bioinformatics analyses in real-time. By leveraging last generation technology now ubiquitous to most researchers (such as smartphones), Telescope delivers a friendly user experience and manages conectivity and encryption under the hood.ConclusionsTelescope helps to mitigate the digital divide between wet and computational laboratories in contemporary biology. By delivering convenience and ease of use through a user experience not relying on expertise with computational clusters, Telescope can help researchers close the feedback loop between bioinformatics and experimental work with minimal impact on the performance of computational tools. Telescope is freely available at https://github.com/Mangul-Lab-USC/telescope.