Constructing realistic neural simulations with GENESIS.

Constructing realistic neural simulations with GENESIS.
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DOI:
10.1007/978-1-59745-520-6_7
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发表时间:
2007-01-01
期刊:
Methods in molecular biology (Clifton, N.J.)
影响因子:
--
通讯作者:
Beeman, David
Beeman, David
中科院分区:
其他
文献类型:
--
作者:
Bower, James M;Beeman, David

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通用神经模拟系统(GENESIS)是一个开源的模拟平台,用于对系统进行逼真的建模,从亚细胞成分和生化反应到单个神经元的详细模型,模拟真实神经元的大型网络和系统级模型。图形界面XODUS允许构建各种各样的界面,用于控制和可视化模拟。面向对象的脚本语言允许人们轻松地构建和修改从GENESIS仿真组件库构建的仿真。在这里,我们介绍了安装GENESIS及其补充教程,运行GENESIS模拟和创建新神经模拟的过程。
The GEneral NEural SImulation System (GENESIS) is an open source simulation platform for realistic modeling of systems ranging from subcellular components and biochemical reactions to detailed models of single neurons, simulations of large networks of realistic neurons, and systems-level models. The graphical interface XODUS permits the construction of a wide variety of interfaces for the control and visualization of simulations. The object-oriented scripting language allows one to easily construct and modify simulations built from the GENESIS libraries of simulation components. Here, we present procedures for installing GENESIS and its supplementary tutorials, running GENESIS simulations, and creating new neural simulations.